AustralieFrV1, Main, Exploration, bibRecord, 006C49

Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris

Identifieur interne : 006C49 ( Main/Exploration ); précédent : 006C48; suivant : 006C50

Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris

Auteurs : Randy M. Berka [États-Unis] ; Igor V. Grigoriev [États-Unis] ; Robert Otillar [États-Unis] ; Asaf Salamov [États-Unis] ; Jane Grimwood [États-Unis] ; Ian Reid [Canada] ; Nadeeza Ishmael [Canada] ; Tricia John [Canada] ; Corinne Darmond [Canada] ; Marie-Claude Moisan [Canada] ; Bernard Henrissat [France] ; Pedro M. Coutinho [France] ; Vincent Lombard [France] ; Donald O. Natvig [États-Unis] ; Erika Lindquist [États-Unis] ; Jeremy Schmutz [États-Unis] ; Susan Lucas [États-Unis] ; Paul Harris [États-Unis] ; Justin Powlowski [Canada] ; Annie Bellemare [Canada] ; David Taylor [Canada] ; Gregory Butler [Canada] ; Ronald P. De Vries [Pays-Bas] ; Iris E. Allijn [Pays-Bas] ; Joost Van Den Brink [Pays-Bas] ; Sophia Ushinsky [Canada] ; Reginald Storms [Canada] ; Amy J. Powell [États-Unis] ; Ian T. Paulsen [Australie] ; Liam D. H. Elbourne [Australie] ; Scott E. Baker [États-Unis] ; Jon Magnuson [États-Unis] ; Sylvie Laboissiere [Canada] ; A. John Clutterbuck [Royaume-Uni] ; Diego Martinez [États-Unis] ; Mark Wogulis [États-Unis] ; Alfredo Lopez De Leon [États-Unis] ; Michael W. Rey [États-Unis] ; Adrian Tsang [Canada]

Source :

Nature biotechnology [ 1087-0156 ] ; 2011.

RBID : Pascal:12-0213532

Descripteurs français

Pascal (Inist)
- Etude comparative, Dégradation biologique, Génome, Thermophilie, Biomasse, Fungi, Myceliophthora thermophila, Enzyme, Transcriptome, Polyoside, Hydrolyse, Biocarburant, Thielavia terrestris.
Wicri :
- topic : Biomasse, Enzyme.

English descriptors

KwdEn :
- Biodegradation, Biofuel, Biomass, Comparative study, Enzyme, Fungi, Genome, Hydrolysis, Myceliophthora thermophila, Polysaccharide, Thermophily, Transcriptome.

Abstract

Thermostable enzymes and thermophilic cell factories may afford economic advantages in the production of many chemicals and biomass-based fuels. Here we describe and compare the genomes of two thermophilic fungi, Myceliophthora thermophila and Thielavia terrestris. To our knowledge, these genomes are the first described for thermophilic eukaryotes and the first complete telomere-to-telomere genomes for filamentous fungi. Genome analyses and experimental data suggest that both thermophiles are capable of hydrolyzing all major polysaccharides found in biomass. Examination of transcriptome data and secreted proteins suggests that the two fungi use shared approaches in the hydrolysis of cellulose and xylan but distinct mechanisms in pectin degradation. Characterization of the biomass-hydrolyzing activity of recombinant enzymes suggests that these organisms are highly efficient in biomass decomposition at both moderate and high temperatures. Furthermore, we present evidence suggesting that aside from representing a potential reservoir of thermostable enzymes, thermophilic fungi are amenable to manipulation using classical and molecular genetics.

Affiliations:

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Le document en format XML

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<sZ>29 aut.</sZ>
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<country>Australie</country>
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<country>Royaume-Uni</country>
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<author><name sortKey="Tsang, Adrian" sort="Tsang, Adrian" uniqKey="Tsang A" first="Adrian" last="Tsang">Adrian Tsang</name>
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<publicationStmt><idno type="wicri:source">INIST</idno>
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<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a">Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris</title>
<author><name sortKey="Berka, Randy M" sort="Berka, Randy M" uniqKey="Berka R" first="Randy M." last="Berka">Randy M. Berka</name>
<affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Novozymes, Inc</s1>
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<country>États-Unis</country>
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</author>
<author><name sortKey="Grigoriev, Igor V" sort="Grigoriev, Igor V" uniqKey="Grigoriev I" first="Igor V." last="Grigoriev">Igor V. Grigoriev</name>
<affiliation wicri:level="2"><inist:fA14 i1="02"><s1>US Department of Energy Joint Genome Institute</s1>
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<author><name sortKey="Otillar, Robert" sort="Otillar, Robert" uniqKey="Otillar R" first="Robert" last="Otillar">Robert Otillar</name>
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<country>États-Unis</country>
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<author><name sortKey="Salamov, Asaf" sort="Salamov, Asaf" uniqKey="Salamov A" first="Asaf" last="Salamov">Asaf Salamov</name>
<affiliation wicri:level="2"><inist:fA14 i1="02"><s1>US Department of Energy Joint Genome Institute</s1>
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<country>États-Unis</country>
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<author><name sortKey="Grimwood, Jane" sort="Grimwood, Jane" uniqKey="Grimwood J" first="Jane" last="Grimwood">Jane Grimwood</name>
<affiliation wicri:level="2"><inist:fA14 i1="03"><s1>HudsonAlpha Institute for Biotechnology</s1>
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<country>États-Unis</country>
<placeName><region type="state">Alabama</region>
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<author><name sortKey="Reid, Ian" sort="Reid, Ian" uniqKey="Reid I" first="Ian" last="Reid">Ian Reid</name>
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</inist:fA14>
<country>Canada</country>
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</affiliation>
</author>
<author><name sortKey="Ishmael, Nadeeza" sort="Ishmael, Nadeeza" uniqKey="Ishmael N" first="Nadeeza" last="Ishmael">Nadeeza Ishmael</name>
<affiliation wicri:level="1"><inist:fA14 i1="04"><s1>Centre for Structural and Functional Genomics, Concordia University</s1>
<s2>Montreal, Quebec</s2>
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</inist:fA14>
<country>Canada</country>
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</affiliation>
</author>
<author><name sortKey="John, Tricia" sort="John, Tricia" uniqKey="John T" first="Tricia" last="John">Tricia John</name>
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<s2>Montreal, Quebec</s2>
<s3>CAN</s3>
<sZ>6 aut.</sZ>
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</inist:fA14>
<country>Canada</country>
<wicri:noRegion>Montreal, Quebec</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Darmond, Corinne" sort="Darmond, Corinne" uniqKey="Darmond C" first="Corinne" last="Darmond">Corinne Darmond</name>
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</inist:fA14>
<country>Canada</country>
<wicri:noRegion>Montreal, Quebec</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Moisan, Marie Claude" sort="Moisan, Marie Claude" uniqKey="Moisan M" first="Marie-Claude" last="Moisan">Marie-Claude Moisan</name>
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</inist:fA14>
<country>Canada</country>
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<author><name sortKey="Henrissat, Bernard" sort="Henrissat, Bernard" uniqKey="Henrissat B" first="Bernard" last="Henrissat">Bernard Henrissat</name>
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<country>France</country>
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<author><name sortKey="Coutinho, Pedro M" sort="Coutinho, Pedro M" uniqKey="Coutinho P" first="Pedro M." last="Coutinho">Pedro M. Coutinho</name>
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<sZ>11 aut.</sZ>
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<country>France</country>
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<author><name sortKey="Lombard, Vincent" sort="Lombard, Vincent" uniqKey="Lombard V" first="Vincent" last="Lombard">Vincent Lombard</name>
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<sZ>11 aut.</sZ>
<sZ>12 aut.</sZ>
<sZ>13 aut.</sZ>
</inist:fA14>
<country>France</country>
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</placeName>
</affiliation>
</author>
<author><name sortKey="Natvig, Donald O" sort="Natvig, Donald O" uniqKey="Natvig D" first="Donald O." last="Natvig">Donald O. Natvig</name>
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<sZ>14 aut.</sZ>
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</inist:fA14>
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<author><name sortKey="Lindquist, Erika" sort="Lindquist, Erika" uniqKey="Lindquist E" first="Erika" last="Lindquist">Erika Lindquist</name>
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<author><name sortKey="Schmutz, Jeremy" sort="Schmutz, Jeremy" uniqKey="Schmutz J" first="Jeremy" last="Schmutz">Jeremy Schmutz</name>
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</inist:fA14>
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</affiliation>
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<author><name sortKey="Lucas, Susan" sort="Lucas, Susan" uniqKey="Lucas S" first="Susan" last="Lucas">Susan Lucas</name>
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<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
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<country>États-Unis</country>
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</placeName>
</affiliation>
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<author><name sortKey="Harris, Paul" sort="Harris, Paul" uniqKey="Harris P" first="Paul" last="Harris">Paul Harris</name>
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<country>États-Unis</country>
<placeName><region type="state">Californie</region>
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</affiliation>
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<author><name sortKey="Powlowski, Justin" sort="Powlowski, Justin" uniqKey="Powlowski J" first="Justin" last="Powlowski">Justin Powlowski</name>
<affiliation wicri:level="1"><inist:fA14 i1="04"><s1>Centre for Structural and Functional Genomics, Concordia University</s1>
<s2>Montreal, Quebec</s2>
<s3>CAN</s3>
<sZ>6 aut.</sZ>
<sZ>7 aut.</sZ>
<sZ>8 aut.</sZ>
<sZ>9 aut.</sZ>
<sZ>10 aut.</sZ>
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<sZ>20 aut.</sZ>
<sZ>21 aut.</sZ>
<sZ>22 aut.</sZ>
<sZ>26 aut.</sZ>
<sZ>27 aut.</sZ>
<sZ>39 aut.</sZ>
</inist:fA14>
<country>Canada</country>
<wicri:noRegion>Montreal, Quebec</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Bellemare, Annie" sort="Bellemare, Annie" uniqKey="Bellemare A" first="Annie" last="Bellemare">Annie Bellemare</name>
<affiliation wicri:level="1"><inist:fA14 i1="04"><s1>Centre for Structural and Functional Genomics, Concordia University</s1>
<s2>Montreal, Quebec</s2>
<s3>CAN</s3>
<sZ>6 aut.</sZ>
<sZ>7 aut.</sZ>
<sZ>8 aut.</sZ>
<sZ>9 aut.</sZ>
<sZ>10 aut.</sZ>
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<sZ>20 aut.</sZ>
<sZ>21 aut.</sZ>
<sZ>22 aut.</sZ>
<sZ>26 aut.</sZ>
<sZ>27 aut.</sZ>
<sZ>39 aut.</sZ>
</inist:fA14>
<country>Canada</country>
<wicri:noRegion>Montreal, Quebec</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Taylor, David" sort="Taylor, David" uniqKey="Taylor D" first="David" last="Taylor">David Taylor</name>
<affiliation wicri:level="1"><inist:fA14 i1="04"><s1>Centre for Structural and Functional Genomics, Concordia University</s1>
<s2>Montreal, Quebec</s2>
<s3>CAN</s3>
<sZ>6 aut.</sZ>
<sZ>7 aut.</sZ>
<sZ>8 aut.</sZ>
<sZ>9 aut.</sZ>
<sZ>10 aut.</sZ>
<sZ>19 aut.</sZ>
<sZ>20 aut.</sZ>
<sZ>21 aut.</sZ>
<sZ>22 aut.</sZ>
<sZ>26 aut.</sZ>
<sZ>27 aut.</sZ>
<sZ>39 aut.</sZ>
</inist:fA14>
<country>Canada</country>
<wicri:noRegion>Montreal, Quebec</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Butler, Gregory" sort="Butler, Gregory" uniqKey="Butler G" first="Gregory" last="Butler">Gregory Butler</name>
<affiliation wicri:level="1"><inist:fA14 i1="04"><s1>Centre for Structural and Functional Genomics, Concordia University</s1>
<s2>Montreal, Quebec</s2>
<s3>CAN</s3>
<sZ>6 aut.</sZ>
<sZ>7 aut.</sZ>
<sZ>8 aut.</sZ>
<sZ>9 aut.</sZ>
<sZ>10 aut.</sZ>
<sZ>19 aut.</sZ>
<sZ>20 aut.</sZ>
<sZ>21 aut.</sZ>
<sZ>22 aut.</sZ>
<sZ>26 aut.</sZ>
<sZ>27 aut.</sZ>
<sZ>39 aut.</sZ>
</inist:fA14>
<country>Canada</country>
<wicri:noRegion>Montreal, Quebec</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Vries, Ronald P De" sort="Vries, Ronald P De" uniqKey="Vries R" first="Ronald P. De" last="Vries">Ronald P. De Vries</name>
<affiliation wicri:level="3"><inist:fA14 i1="07"><s1>CBS-KNAW Fungal Biodiversity Centre</s1>
<s2>Utrecht</s2>
<s3>NLD</s3>
<sZ>23 aut.</sZ>
<sZ>24 aut.</sZ>
<sZ>25 aut.</sZ>
</inist:fA14>
<country>Pays-Bas</country>
<placeName><settlement type="city">Utrecht</settlement>
<region nuts="2" type="province">Utrecht (province)</region>
</placeName>
</affiliation>
<affiliation wicri:level="4"><inist:fA14 i1="08"><s1>Microbiology and Kluyver Centre for Genomics of Industrial Fermentation, Utrecht University</s1>
<s2>Utrecht</s2>
<s3>NLD</s3>
<sZ>23 aut.</sZ>
</inist:fA14>
<country>Pays-Bas</country>
<placeName><settlement type="city">Utrecht</settlement>
<region nuts="2" type="province">Utrecht (province)</region>
<settlement type="city">Utrecht</settlement>
</placeName>
<orgName type="university">Université d'Utrecht</orgName>
</affiliation>
</author>
<author><name sortKey="Allijn, Iris E" sort="Allijn, Iris E" uniqKey="Allijn I" first="Iris E." last="Allijn">Iris E. Allijn</name>
<affiliation wicri:level="3"><inist:fA14 i1="07"><s1>CBS-KNAW Fungal Biodiversity Centre</s1>
<s2>Utrecht</s2>
<s3>NLD</s3>
<sZ>23 aut.</sZ>
<sZ>24 aut.</sZ>
<sZ>25 aut.</sZ>
</inist:fA14>
<country>Pays-Bas</country>
<placeName><settlement type="city">Utrecht</settlement>
<region nuts="2" type="province">Utrecht (province)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Van Den Brink, Joost" sort="Van Den Brink, Joost" uniqKey="Van Den Brink J" first="Joost" last="Van Den Brink">Joost Van Den Brink</name>
<affiliation wicri:level="3"><inist:fA14 i1="07"><s1>CBS-KNAW Fungal Biodiversity Centre</s1>
<s2>Utrecht</s2>
<s3>NLD</s3>
<sZ>23 aut.</sZ>
<sZ>24 aut.</sZ>
<sZ>25 aut.</sZ>
</inist:fA14>
<country>Pays-Bas</country>
<placeName><settlement type="city">Utrecht</settlement>
<region nuts="2" type="province">Utrecht (province)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Ushinsky, Sophia" sort="Ushinsky, Sophia" uniqKey="Ushinsky S" first="Sophia" last="Ushinsky">Sophia Ushinsky</name>
<affiliation wicri:level="1"><inist:fA14 i1="04"><s1>Centre for Structural and Functional Genomics, Concordia University</s1>
<s2>Montreal, Quebec</s2>
<s3>CAN</s3>
<sZ>6 aut.</sZ>
<sZ>7 aut.</sZ>
<sZ>8 aut.</sZ>
<sZ>9 aut.</sZ>
<sZ>10 aut.</sZ>
<sZ>19 aut.</sZ>
<sZ>20 aut.</sZ>
<sZ>21 aut.</sZ>
<sZ>22 aut.</sZ>
<sZ>26 aut.</sZ>
<sZ>27 aut.</sZ>
<sZ>39 aut.</sZ>
</inist:fA14>
<country>Canada</country>
<wicri:noRegion>Montreal, Quebec</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Storms, Reginald" sort="Storms, Reginald" uniqKey="Storms R" first="Reginald" last="Storms">Reginald Storms</name>
<affiliation wicri:level="1"><inist:fA14 i1="04"><s1>Centre for Structural and Functional Genomics, Concordia University</s1>
<s2>Montreal, Quebec</s2>
<s3>CAN</s3>
<sZ>6 aut.</sZ>
<sZ>7 aut.</sZ>
<sZ>8 aut.</sZ>
<sZ>9 aut.</sZ>
<sZ>10 aut.</sZ>
<sZ>19 aut.</sZ>
<sZ>20 aut.</sZ>
<sZ>21 aut.</sZ>
<sZ>22 aut.</sZ>
<sZ>26 aut.</sZ>
<sZ>27 aut.</sZ>
<sZ>39 aut.</sZ>
</inist:fA14>
<country>Canada</country>
<wicri:noRegion>Montreal, Quebec</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Powell, Amy J" sort="Powell, Amy J" uniqKey="Powell A" first="Amy J." last="Powell">Amy J. Powell</name>
<affiliation wicri:level="2"><inist:fA14 i1="09"><s1>Sandia National Laboratory</s1>
<s2>Albuquerque, New Mexico</s2>
<s3>USA</s3>
<sZ>28 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<placeName><region type="state">Nouveau-Mexique</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Paulsen, Ian T" sort="Paulsen, Ian T" uniqKey="Paulsen I" first="Ian T." last="Paulsen">Ian T. Paulsen</name>
<affiliation wicri:level="3"><inist:fA14 i1="10"><s1>Department of Chemistry and Biomolecular Sciences, Macquarie University</s1>
<s2>Sydney</s2>
<s3>AUS</s3>
<sZ>29 aut.</sZ>
<sZ>30 aut.</sZ>
</inist:fA14>
<country>Australie</country>
<placeName><settlement type="city">Sydney</settlement>
<region type="état">Nouvelle-Galles du Sud</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Elbourne, Liam D H" sort="Elbourne, Liam D H" uniqKey="Elbourne L" first="Liam D. H." last="Elbourne">Liam D. H. Elbourne</name>
<affiliation wicri:level="3"><inist:fA14 i1="10"><s1>Department of Chemistry and Biomolecular Sciences, Macquarie University</s1>
<s2>Sydney</s2>
<s3>AUS</s3>
<sZ>29 aut.</sZ>
<sZ>30 aut.</sZ>
</inist:fA14>
<country>Australie</country>
<placeName><settlement type="city">Sydney</settlement>
<region type="état">Nouvelle-Galles du Sud</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Baker, Scott E" sort="Baker, Scott E" uniqKey="Baker S" first="Scott E." last="Baker">Scott E. Baker</name>
<affiliation wicri:level="2"><inist:fA14 i1="11"><s1>Fungal Biotechnology Team, Pacific Northwest National Laboratory</s1>
<s2>Richland, Washington</s2>
<s3>USA</s3>
<sZ>31 aut.</sZ>
<sZ>32 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<placeName><region type="state">Washington (État)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Magnuson, Jon" sort="Magnuson, Jon" uniqKey="Magnuson J" first="Jon" last="Magnuson">Jon Magnuson</name>
<affiliation wicri:level="2"><inist:fA14 i1="11"><s1>Fungal Biotechnology Team, Pacific Northwest National Laboratory</s1>
<s2>Richland, Washington</s2>
<s3>USA</s3>
<sZ>31 aut.</sZ>
<sZ>32 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<placeName><region type="state">Washington (État)</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Laboissiere, Sylvie" sort="Laboissiere, Sylvie" uniqKey="Laboissiere S" first="Sylvie" last="Laboissiere">Sylvie Laboissiere</name>
<affiliation wicri:level="3"><inist:fA14 i1="12"><s1>McGill University and Genome Quebec Innovation Centre</s1>
<s2>Montreal</s2>
<s3>CAN</s3>
<sZ>33 aut.</sZ>
</inist:fA14>
<country>Canada</country>
<placeName><settlement type="city">Montréal</settlement>
<region type="state">Québec</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="John Clutterbuck, A" sort="John Clutterbuck, A" uniqKey="John Clutterbuck A" first="A." last="John Clutterbuck">A. John Clutterbuck</name>
<affiliation wicri:level="4"><inist:fA14 i1="13"><s1>University of Glasgow</s1>
<s2>Glasgow</s2>
<s3>GBR</s3>
<sZ>34 aut.</sZ>
</inist:fA14>
<country>Royaume-Uni</country>
<placeName><settlement type="city">Glasgow</settlement>
<region type="country">Écosse</region>
</placeName>
<orgName type="university">Université de Glasgow</orgName>
</affiliation>
</author>
<author><name sortKey="Martinez, Diego" sort="Martinez, Diego" uniqKey="Martinez D" first="Diego" last="Martinez">Diego Martinez</name>
<affiliation wicri:level="2"><inist:fA14 i1="06"><s1>Department of Biology, University of New Mexico</s1>
<s2>Albuquerque, New Mexico</s2>
<s3>USA</s3>
<sZ>14 aut.</sZ>
<sZ>35 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<placeName><region type="state">Nouveau-Mexique</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Wogulis, Mark" sort="Wogulis, Mark" uniqKey="Wogulis M" first="Mark" last="Wogulis">Mark Wogulis</name>
<affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Novozymes, Inc</s1>
<s2>Davis, California</s2>
<s3>USA</s3>
<sZ>1 aut.</sZ>
<sZ>18 aut.</sZ>
<sZ>36 aut.</sZ>
<sZ>37 aut.</sZ>
<sZ>38 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<placeName><region type="state">Californie</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Leon, Alfredo Lopez De" sort="Leon, Alfredo Lopez De" uniqKey="Leon A" first="Alfredo Lopez De" last="Leon">Alfredo Lopez De Leon</name>
<affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Novozymes, Inc</s1>
<s2>Davis, California</s2>
<s3>USA</s3>
<sZ>1 aut.</sZ>
<sZ>18 aut.</sZ>
<sZ>36 aut.</sZ>
<sZ>37 aut.</sZ>
<sZ>38 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<placeName><region type="state">Californie</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Rey, Michael W" sort="Rey, Michael W" uniqKey="Rey M" first="Michael W." last="Rey">Michael W. Rey</name>
<affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Novozymes, Inc</s1>
<s2>Davis, California</s2>
<s3>USA</s3>
<sZ>1 aut.</sZ>
<sZ>18 aut.</sZ>
<sZ>36 aut.</sZ>
<sZ>37 aut.</sZ>
<sZ>38 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<placeName><region type="state">Californie</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Tsang, Adrian" sort="Tsang, Adrian" uniqKey="Tsang A" first="Adrian" last="Tsang">Adrian Tsang</name>
<affiliation wicri:level="1"><inist:fA14 i1="04"><s1>Centre for Structural and Functional Genomics, Concordia University</s1>
<s2>Montreal, Quebec</s2>
<s3>CAN</s3>
<sZ>6 aut.</sZ>
<sZ>7 aut.</sZ>
<sZ>8 aut.</sZ>
<sZ>9 aut.</sZ>
<sZ>10 aut.</sZ>
<sZ>19 aut.</sZ>
<sZ>20 aut.</sZ>
<sZ>21 aut.</sZ>
<sZ>22 aut.</sZ>
<sZ>26 aut.</sZ>
<sZ>27 aut.</sZ>
<sZ>39 aut.</sZ>
</inist:fA14>
<country>Canada</country>
<wicri:noRegion>Montreal, Quebec</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series><title level="j" type="main">Nature biotechnology</title>
<title level="j" type="abbreviated">Nat. biotechnol.</title>
<idno type="ISSN">1087-0156</idno>
<imprint><date when="2011">2011</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
<seriesStmt><title level="j" type="main">Nature biotechnology</title>
<title level="j" type="abbreviated">Nat. biotechnol.</title>
<idno type="ISSN">1087-0156</idno>
</seriesStmt>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Biodegradation</term>
<term>Biofuel</term>
<term>Biomass</term>
<term>Comparative study</term>
<term>Enzyme</term>
<term>Fungi</term>
<term>Genome</term>
<term>Hydrolysis</term>
<term>Myceliophthora thermophila</term>
<term>Polysaccharide</term>
<term>Thermophily</term>
<term>Transcriptome</term>
</keywords>
<keywords scheme="Pascal" xml:lang="fr"><term>Etude comparative</term>
<term>Dégradation biologique</term>
<term>Génome</term>
<term>Thermophilie</term>
<term>Biomasse</term>
<term>Fungi</term>
<term>Myceliophthora thermophila</term>
<term>Enzyme</term>
<term>Transcriptome</term>
<term>Polyoside</term>
<term>Hydrolyse</term>
<term>Biocarburant</term>
<term>Thielavia terrestris</term>
</keywords>
<keywords scheme="Wicri" type="topic" xml:lang="fr"><term>Biomasse</term>
<term>Enzyme</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Thermostable enzymes and thermophilic cell factories may afford economic advantages in the production of many chemicals and biomass-based fuels. Here we describe and compare the genomes of two thermophilic fungi, Myceliophthora thermophila and Thielavia terrestris. To our knowledge, these genomes are the first described for thermophilic eukaryotes and the first complete telomere-to-telomere genomes for filamentous fungi. Genome analyses and experimental data suggest that both thermophiles are capable of hydrolyzing all major polysaccharides found in biomass. Examination of transcriptome data and secreted proteins suggests that the two fungi use shared approaches in the hydrolysis of cellulose and xylan but distinct mechanisms in pectin degradation. Characterization of the biomass-hydrolyzing activity of recombinant enzymes suggests that these organisms are highly efficient in biomass decomposition at both moderate and high temperatures. Furthermore, we present evidence suggesting that aside from representing a potential reservoir of thermostable enzymes, thermophilic fungi are amenable to manipulation using classical and molecular genetics.</div>
</front>
</TEI>
<affiliations><list><country><li>Australie</li>
<li>Canada</li>
<li>France</li>
<li>Pays-Bas</li>
<li>Royaume-Uni</li>
<li>États-Unis</li>
</country>
<region><li>Alabama</li>
<li>Californie</li>
<li>Nouveau-Mexique</li>
<li>Nouvelle-Galles du Sud</li>
<li>Provence-Alpes-Côte d'Azur</li>
<li>Québec</li>
<li>Utrecht (province)</li>
<li>Washington (État)</li>
<li>Écosse</li>
</region>
<settlement><li>Glasgow</li>
<li>Marseille</li>
<li>Montréal</li>
<li>Sydney</li>
<li>Utrecht</li>
</settlement>
<orgName><li>Université d'Utrecht</li>
<li>Université de Glasgow</li>
</orgName>
</list>
<tree><country name="États-Unis"><region name="Californie"><name sortKey="Berka, Randy M" sort="Berka, Randy M" uniqKey="Berka R" first="Randy M." last="Berka">Randy M. Berka</name>
</region>
<name sortKey="Baker, Scott E" sort="Baker, Scott E" uniqKey="Baker S" first="Scott E." last="Baker">Scott E. Baker</name>
<name sortKey="Grigoriev, Igor V" sort="Grigoriev, Igor V" uniqKey="Grigoriev I" first="Igor V." last="Grigoriev">Igor V. Grigoriev</name>
<name sortKey="Grimwood, Jane" sort="Grimwood, Jane" uniqKey="Grimwood J" first="Jane" last="Grimwood">Jane Grimwood</name>
<name sortKey="Harris, Paul" sort="Harris, Paul" uniqKey="Harris P" first="Paul" last="Harris">Paul Harris</name>
<name sortKey="Leon, Alfredo Lopez De" sort="Leon, Alfredo Lopez De" uniqKey="Leon A" first="Alfredo Lopez De" last="Leon">Alfredo Lopez De Leon</name>
<name sortKey="Lindquist, Erika" sort="Lindquist, Erika" uniqKey="Lindquist E" first="Erika" last="Lindquist">Erika Lindquist</name>
<name sortKey="Lucas, Susan" sort="Lucas, Susan" uniqKey="Lucas S" first="Susan" last="Lucas">Susan Lucas</name>
<name sortKey="Magnuson, Jon" sort="Magnuson, Jon" uniqKey="Magnuson J" first="Jon" last="Magnuson">Jon Magnuson</name>
<name sortKey="Martinez, Diego" sort="Martinez, Diego" uniqKey="Martinez D" first="Diego" last="Martinez">Diego Martinez</name>
<name sortKey="Natvig, Donald O" sort="Natvig, Donald O" uniqKey="Natvig D" first="Donald O." last="Natvig">Donald O. Natvig</name>
<name sortKey="Otillar, Robert" sort="Otillar, Robert" uniqKey="Otillar R" first="Robert" last="Otillar">Robert Otillar</name>
<name sortKey="Powell, Amy J" sort="Powell, Amy J" uniqKey="Powell A" first="Amy J." last="Powell">Amy J. Powell</name>
<name sortKey="Rey, Michael W" sort="Rey, Michael W" uniqKey="Rey M" first="Michael W." last="Rey">Michael W. Rey</name>
<name sortKey="Salamov, Asaf" sort="Salamov, Asaf" uniqKey="Salamov A" first="Asaf" last="Salamov">Asaf Salamov</name>
<name sortKey="Schmutz, Jeremy" sort="Schmutz, Jeremy" uniqKey="Schmutz J" first="Jeremy" last="Schmutz">Jeremy Schmutz</name>
<name sortKey="Wogulis, Mark" sort="Wogulis, Mark" uniqKey="Wogulis M" first="Mark" last="Wogulis">Mark Wogulis</name>
</country>
<country name="Canada"><noRegion><name sortKey="Reid, Ian" sort="Reid, Ian" uniqKey="Reid I" first="Ian" last="Reid">Ian Reid</name>
</noRegion>
<name sortKey="Bellemare, Annie" sort="Bellemare, Annie" uniqKey="Bellemare A" first="Annie" last="Bellemare">Annie Bellemare</name>
<name sortKey="Butler, Gregory" sort="Butler, Gregory" uniqKey="Butler G" first="Gregory" last="Butler">Gregory Butler</name>
<name sortKey="Darmond, Corinne" sort="Darmond, Corinne" uniqKey="Darmond C" first="Corinne" last="Darmond">Corinne Darmond</name>
<name sortKey="Ishmael, Nadeeza" sort="Ishmael, Nadeeza" uniqKey="Ishmael N" first="Nadeeza" last="Ishmael">Nadeeza Ishmael</name>
<name sortKey="John, Tricia" sort="John, Tricia" uniqKey="John T" first="Tricia" last="John">Tricia John</name>
<name sortKey="Laboissiere, Sylvie" sort="Laboissiere, Sylvie" uniqKey="Laboissiere S" first="Sylvie" last="Laboissiere">Sylvie Laboissiere</name>
<name sortKey="Moisan, Marie Claude" sort="Moisan, Marie Claude" uniqKey="Moisan M" first="Marie-Claude" last="Moisan">Marie-Claude Moisan</name>
<name sortKey="Powlowski, Justin" sort="Powlowski, Justin" uniqKey="Powlowski J" first="Justin" last="Powlowski">Justin Powlowski</name>
<name sortKey="Storms, Reginald" sort="Storms, Reginald" uniqKey="Storms R" first="Reginald" last="Storms">Reginald Storms</name>
<name sortKey="Taylor, David" sort="Taylor, David" uniqKey="Taylor D" first="David" last="Taylor">David Taylor</name>
<name sortKey="Tsang, Adrian" sort="Tsang, Adrian" uniqKey="Tsang A" first="Adrian" last="Tsang">Adrian Tsang</name>
<name sortKey="Ushinsky, Sophia" sort="Ushinsky, Sophia" uniqKey="Ushinsky S" first="Sophia" last="Ushinsky">Sophia Ushinsky</name>
</country>
<country name="France"><region name="Provence-Alpes-Côte d'Azur"><name sortKey="Henrissat, Bernard" sort="Henrissat, Bernard" uniqKey="Henrissat B" first="Bernard" last="Henrissat">Bernard Henrissat</name>
</region>
<name sortKey="Coutinho, Pedro M" sort="Coutinho, Pedro M" uniqKey="Coutinho P" first="Pedro M." last="Coutinho">Pedro M. Coutinho</name>
<name sortKey="Lombard, Vincent" sort="Lombard, Vincent" uniqKey="Lombard V" first="Vincent" last="Lombard">Vincent Lombard</name>
</country>
<country name="Pays-Bas"><region name="Utrecht (province)"><name sortKey="Vries, Ronald P De" sort="Vries, Ronald P De" uniqKey="Vries R" first="Ronald P. De" last="Vries">Ronald P. De Vries</name>
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   |texte=   Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris
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	Serveur d'exploration sur les relations entre la France et l'Australie
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Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris

Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris

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